All Publications

Publications for all Oxford Principal Investigators within the CAMS Oxford Institute are included here, please use the search functions for publications related to specific Principal Investigators.

Loop extrusion by cohesin plays a key role in enhancer-activated gene expression during differentiation

Stolper RJ. et al, (2023)

Understanding fundamental principles of enhancer biology at a model locus: Analysing the structure and function of an enhancer cluster at the α-globin locus.

Kassouf M. et al, (2023), Bioessays

Scalable in vitro production of defined mouse erythroblasts.

Francis HS. et al, (2022), PloS one, 17

An integrative view of the regulatory and transcriptional landscapes in mouse hematopoiesis.

Xiang G. et al, (2020), Genome research

A revised model for promoter competition based on multi-way chromatin interactions at the α-globin locus

Oudelaar AM. et al, (2019), Nature Communications, 10

An integrated platform to systematically identify causal variants and genes for polygenic human traits

Downes DJ. et al, (2019)

The bipartite TAD organization of the X-inactivation center ensures opposing developmental regulation of Tsix and Xist.

van Bemmel JG. et al, (2019), Nature genetics

Single-Cell Proteomics Reveal that Quantitative Changes in Co-expressed Lineage-Specific Transcription Factors Determine Cell Fate.

Palii CG. et al, (2019), Cell Stem Cell, 24, 812 - 820.e5

How to Tackle Challenging ChIP-Seq, with Long-Range Cross-Linking, Using ATRX as an Example.

Truch J. et al, (2019), Methods in molecular biology (Clifton, N.J.), 1832, 105 - 130

The Loss of ATRX Increases Susceptibility to Pancreatic Injury and Oncogenic KRAS in Female But Not Male Mice.

Young CC. et al, (2019), Cell Mol Gastroenterol Hepatol, 7, 93 - 113

Potential new approaches to the management of the Hb Bart's hydrops fetalis syndrome: the most severe form of α-thalassemia.

King AJ. and Higgs DR., (2018), Hematology Am Soc Hematol Educ Program, 2018, 353 - 360

Single-allele chromatin interactions identify regulatory hubs in dynamic compartmentalized domains.

Oudelaar AM. et al, (2018), Nat Genet

A tissue-specific self-interacting chromatin domain forms independently of enhancer-promoter interactions.

Brown JM. et al, (2018), Nat Commun, 9

Robust CRISPR/Cas9 Genome Editing of the HUDEP-2 Erythroid Precursor Line Using Plasmids and Single Stranded Oligonucleotide Donors

BABBS C. et al, (2018), Methods and Protocols

Anaemia among females in child-bearing age: Relative contributions, effects and interactions of α- and β-thalassaemia.

Mettananda S. et al, (2018), PLoS One, 13

Robust detection of chromosomal interactions from small numbers of cells using low-input Capture-C.

Oudelaar AM. et al, (2017), Nucleic Acids Res, 45

Between form and function: the complexity of genome folding.

Oudelaar AM. et al, (2017), Hum Mol Genet, 26, R208 - R215

Sasquatch: predicting the impact of regulatory SNPs on transcription factor binding from cell- and tissue-specific DNase footprints.

Schwessinger R. et al, (2017), Genome research, 27, 1730 - 1742

Tissue-specific CTCF-cohesin-mediated chromatin architecture delimits enhancer interactions and function in vivo.

Hanssen LLP. et al, (2017), Nature cell biology, 19, 952 - 961

A novel 33-Gene targeted resequencing panel provides accurate, clinical-grade diagnosis and improves patient management for rare inherited anaemias.

Roy NB. et al, (2016), British journal of haematology, 175, 318 - 330

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All Publications